euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

150 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip3190 chr1 105028221 105028221 + unknown germline . no 221 .
srip4133 chr1 149308428 149308428 + unknown germline . no 221 LOC645262
srip6451 chr1 217548991 217548991 - unknown germline . no 221 .
srip7076 chr1 231007802 231007802 - unknown germline . no 221 .
srip7214 chr1 237449858 237449858 . unknown germline . no 221 RYR2
srip7385 chr1 242311569 242311569 + unknown germline . no 221 PLD5
srip7570 chr10 5061314 5061314 - unknown germline . no 221 .
srip8106 chr10 23842050 23842050 - unknown germline . no 221 .
srip8456 chr10 25707693 25707693 - unknown germline . no 221 GPR158
srip9802 chr10 82972200 82972200 . unknown germline . no 221 .
srip10592 chr10 91717640 91717640 - unknown germline . no 221 .
srip11833 chr10 124455225 124455225 + unknown germline . no 221 .
srip12540 chr11 15380252 15380252 + unknown germline . no 221 .
srip13192 chr11 28798133 28798133 - unknown germline . no 221 .
srip13808 chr11 33670130 33670130 + unknown germline . no 221 C11orf41
srip13844 chr11 35221492 35221492 . unknown germline . no 221 CD44
srip13864 chr11 36558481 36558481 - unknown germline . no 221 .
srip14241 chr11 41831803 41831803 - unknown germline . no 221 .
srip14999 chr11 50399973 50399973 - unknown germline . no 221 .
srip16871 chr11 94677841 94677841 - unknown germline . no 221 .
srip17197 chr11 94684368 94684368 + unknown germline . no 221 .
srip17663 chr11 104556129 104556129 - unknown germline . no 221 .
srip18474 chr11 123241793 123241793 + unknown germline . no 221 .
srip19252 chr11 134305645 134305645 - unknown germline . no 221 .
srip19759 chr12 11191379 11191379 - unknown germline . no 221 PRH1-PRR4
srip19877 chr12 11219185 11219185 - unknown germline . no 221 PRH1-PRR4
srip20150 chr12 12933687 12933687 - unknown germline . no 221 APOLD1
srip20378 chr12 24868694 24868694 - unknown germline . no 221 .
srip20736 chr12 28226420 28226420 - unknown germline . no 221 .
srip22210 chr12 43256979 43256979 - unknown germline . no 221 .
srip23137 chr12 66451382 66451382 - unknown germline . no 221 .
srip25104 chr12 95808453 95808453 - unknown germline . no 221 .
srip25653 chr12 117814453 117814453 - unknown germline . no 221 .
srip26378 chr12 126802936 126802936 - unknown germline . no 221 .
srip27999 chr13 42771396 42771396 + unknown germline . no 221 DGKH
srip29230 chr13 61681805 61681805 - unknown germline . no 221 .
srip30439 chr13 74613213 74613213 - unknown germline . no 221 KLF12
srip30993 chr13 79259790 79259790 - unknown germline . no 221 .
srip31405 chr13 85871594 85871594 - unknown germline . no 221 .
srip33552 chr13 104296230 104296230 - unknown germline . no 221 .
srip35867 chr14 36674752 36674752 + unknown germline . no 221 .
srip37170 chr14 55267489 55267489 + unknown germline . no 221 .
srip38294 chr14 72336921 72336921 - unknown germline . no 221 .
srip42256 chr15 77910870 77910870 . unknown germline . no 221 LINGO1
srip42519 chr15 83551628 83551628 - unknown germline . no 221 HOMER2
srip43245 chr15 100931152 100931152 - unknown germline . no 221 .
srip45501 chr16 33992437 33992437 . unknown germline . no 221 .
srip47204 chr17 28398310 28398310 + unknown germline . no 221 EFCAB5
srip47695 chr17 32813627 32813627 + unknown germline . no 221 .
srip48590 chr17 77934594 77934594 . unknown germline . no 221 TBC1D16
srip48960 chr18 15095252 15095252 - unknown germline . no 221 .
srip49165 chr18 27219182 27219182 . unknown germline . no 221 .
srip50025 chr18 49216225 49216225 - unknown germline . no 221 .
srip50159 chr18 50097743 50097743 - unknown germline . no 221 DCC
srip50361 chr18 51425734 51425734 - unknown germline . no 221 .
srip50396 chr18 51488332 51488332 - unknown germline . no 221 .
srip50737 chr18 51762737 51762737 - unknown germline . no 221 .
srip52427 chr19 45444694 45444694 + unknown germline . no 221 .
srip53686 chr2 24796768 24796768 . unknown germline . no 221 .
srip54252 chr2 36570251 36570251 - unknown germline . no 221 .
srip54639 chr2 42051410 42051410 + unknown germline . no 221 .
srip56755 chr2 102912441 102912441 + unknown germline . no 221 .
srip58565 chr2 144010786 144010786 + unknown germline . no 221 ARHGAP15
srip59623 chr2 156527841 156527841 + unknown germline . no 221 .
srip59874 chr2 173854091 173854091 - unknown germline . no 221 RAPGEF4
srip59960 chr2 177983639 177983639 + unknown germline . no 221 .
srip61930 chr2 221278227 221278227 - unknown germline . no 221 .
srip62480 chr2 234095337 234095337 . unknown germline . no 221 INPP5D
srip62641 chr2 235519803 235519803 + unknown germline . no 221 .
srip62672 chr2 238252208 238252208 + unknown germline . no 221 COL6A3
srip63057 chr20 7292193 7292193 + unknown germline . no 221 .
srip64033 chr20 25895497 25895497 - unknown germline . no 221 .
srip64070 chr20 25903875 25903875 - unknown germline . no 221 .
srip64772 chr20 41952105 41952105 - unknown germline . no 221 .
srip65122 chr20 50967353 50967353 - unknown germline . no 221 .
srip65429 chr21 11106343 11106343 . unknown germline . no 221 .
srip65542 chr21 14390190 14390190 - unknown germline . no 221 .
srip65861 chr21 19517305 19517305 - unknown germline . no 221 .
srip67841 chr22 22715595 22715595 + unknown germline . no 221 IGL@
srip70871 chr3 25802348 25802348 . unknown germline . no 221 NGLY1
srip71078 chr3 26524455 26524455 - unknown germline . no 221 .
srip72715 chr3 55788574 55788574 + unknown germline . no 221 ERC2
srip73388 chr3 59852896 59852896 + unknown germline . no 221 FHIT
srip73786 chr3 75101217 75101217 + unknown germline . no 221 .
srip73926 chr3 75728590 75728590 - unknown germline . no 221 .
srip75291 chr3 84593281 84593281 . unknown germline . no 221 .
srip77240 chr3 123590719 123590719 + unknown germline . no 221 MYLK
srip78158 chr3 143121764 143121764 - unknown germline . no 221 SLC9A9
srip78640 chr3 151148548 151148548 - unknown germline . no 221 MED12L
srip80859 chr3 181192836 181192836 + unknown germline . no 221 .
srip82109 chr3 193354172 193354172 - unknown germline . no 221 OPA1
srip82411 chr4 10632686 10632686 - unknown germline . no 221 CLNK
srip82978 chr4 18162684 18162684 - unknown germline . no 221 .
srip84701 chr4 47007787 47007787 - unknown germline . no 221 .
srip85123 chr4 53628484 53628484 + unknown germline . no 221 .
srip87678 chr4 82515390 82515390 . unknown germline . no 221 .
srip91597 chr4 132181655 132181655 - unknown germline . no 221 .
srip93872 chr4 158907279 158907279 - unknown germline . no 221 .
srip94664 chr4 176733471 176733471 . unknown germline . no 221 GPM6A;LOC100506176
srip95440 chr4 190927501 190927501 + unknown germline . no 221 .
srip95445 chr4 190969819 190969819 + unknown germline . no 221 .
srip96066 chr5 8749521 8749521 + unknown germline . no 221 .
srip97731 chr5 33633341 33633341 - unknown germline . no 221 ADAMTS12
srip98418 chr5 42475007 42475007 . unknown germline . no 221 GHR
srip99509 chr5 68263468 68263468 - unknown germline . no 221 .
srip100711 chr5 89450774 89450774 + unknown germline . no 221 .
srip101077 chr5 96866415 96866415 + unknown germline . no 221 .
srip104320 chr5 147263411 147263411 - unknown germline . no 221 .
srip105814 chr5 164495148 164495148 - unknown germline . no 221 LOC100507193
srip107066 chr6 13191022 13191022 + unknown germline . no 221 PHACTR1
srip107524 chr6 13503042 13503042 + unknown germline . no 221 .
srip107657 chr6 18622825 18622825 . unknown germline . no 221 .
srip108698 chr6 46310298 46310298 + unknown germline . no 221 .
srip109124 chr6 57494221 57494221 - unknown germline . no 221 PRIM2
srip110570 chr6 77046781 77046781 + unknown germline . no 221 .
srip111053 chr6 77980645 77980645 - unknown germline . no 221 .
srip112699 chr6 102283763 102283763 - unknown germline . no 221 GRIK2
srip113821 chr6 142450107 142450107 - unknown germline . no 221 .
srip114771 chr6 148195798 148195798 + unknown germline . no 221 .
srip116571 chr7 25996902 25996902 . unknown germline . no 221 .
srip117453 chr7 52789459 52789459 + unknown germline . no 221 .
srip117717 chr7 57728085 57728085 - unknown germline . no 221 LOC100287663
srip117898 chr7 57768877 57768877 - unknown germline . no 221 LOC100287663
srip118310 chr7 62492939 62492939 + unknown germline . no 221 .
srip118506 chr7 66591178 66591178 - unknown germline . no 221 TYW1
srip118880 chr7 70188681 70188681 - unknown germline . no 221 AUTS2
srip121010 chr7 99718748 99718748 - unknown germline . no 221 CNPY4
srip121730 chr7 107829256 107829256 + unknown germline . no 221 NRCAM
srip122018 chr7 108325670 108325670 + unknown germline . no 221 .
srip122265 chr7 110484750 110484750 + unknown germline . no 221 IMMP2L
srip123130 chr7 135015346 135015346 . unknown germline . no 221 .
srip124079 chr8 4452901 4452901 - unknown germline . no 221 CSMD1
srip124380 chr8 5829282 5829282 - unknown germline . no 221 .
srip127435 chr8 72399228 72399228 - unknown germline . no 221 .
srip127473 chr8 74587600 74587600 + unknown germline . no 221 STAU2
srip128293 chr8 87315042 87315042 + unknown germline . no 221 .
srip128456 chr8 92186274 92186274 - unknown germline . no 221 LRRC69
srip128746 chr8 106679011 106679011 + unknown germline . no 221 ZFPM2
srip129142 chr8 115788572 115788572 - unknown germline . no 221 .
srip130342 chr8 134972233 134972233 + unknown germline . no 221 .
srip131090 chr9 6290487 6290487 + unknown germline . no 221 .
srip131359 chr9 7741401 7741401 + unknown germline . no 221 .
srip131657 chr9 10163181 10163181 + unknown germline . no 221 PTPRD
srip132859 chr9 32092741 32092741 - unknown germline . no 221 .
srip133411 chr9 32463891 32463891 - unknown germline . no 221 DDX58
srip133629 chr9 34904794 34904794 - unknown germline . no 221 .
srip135886 chr9 118083873 118083873 . unknown germline . no 221 DEC1
srip137259 chrX 54917144 54917144 + unknown germline . no 221 .
srip139452 chrX 85781791 85781791 + unknown germline . no 221 DACH2
srip141070 chrX 122664864 122664864 - unknown germline . no 221 .